Postgraduate Course: Quantitating drug binding (PGBI11038)
Course Outline
School | School of Biological Sciences |
College | College of Science and Engineering |
Credit level (Normal year taken) | SCQF Level 11 (Postgraduate) |
Availability | Not available to visiting students |
SCQF Credits | 10 |
ECTS Credits | 5 |
Summary | In three practical sessions, students individually will determine the binding constant of an agonist to rat-brain muscarinic acetylcholine receptor using a filter assay to measure bound receptor. Further sessions will derive the binding constants and total number of receptors from the data, including use of non-linear least squares fit to the hyperbola describing binding. This analysis will be used to determine variances for the parameters fitted and will lead to a critical examination of the design of the experiment. Other techniques for determining binding constants will be considered, with an emphasis on the appropriate windows in which they can be applied and on potential artefacts and pitfalls. |
Course description |
Week Title
1 Introduction
2 Setting the biological context
3 Practical - Day1
4 Practical - Day 2
5 Practical - Day 3
6 Isothermal Calorimetry and demonstration
7 Fitting binding isotherms - theory
8 Fitting binding isotherms - practice
9 Demonstrations - Surface Plasmon Resonance, fluorescence
10 Formative Peer Assessment on Posters
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Entry Requirements (not applicable to Visiting Students)
Pre-requisites |
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Co-requisites | |
Prohibited Combinations | |
Other requirements | None |
Course Delivery Information
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Academic year 2017/18, Not available to visiting students (SS1)
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Quota: 21 |
Course Start |
Semester 1 |
Timetable |
Timetable |
Learning and Teaching activities (Further Info) |
Total Hours:
100
(
Lecture Hours 6,
Supervised Practical/Workshop/Studio Hours 14,
Programme Level Learning and Teaching Hours 2,
Directed Learning and Independent Learning Hours
78 )
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Assessment (Further Info) |
Written Exam
0 %,
Coursework
100 %,
Practical Exam
0 %
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Additional Information (Assessment) |
Extended Practical report 50 %
Webfolio on a specific technique 30 %
Blog/e-Portfolio 20 %
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Feedback |
Not entered |
No Exam Information |
Learning Outcomes
On completion of this course, the student will be able to:
- Understand how drug binding to their targets is measured and to assess critically pit-falls in methods, their interpretation, and the statistical basis of how relevant numerical values are derived;
- Perform in the laboratory, safely and competently, measurements of drug binding, and interpret results in the light of theoretical understanding;
- Develop self-organisation and autonomy through practical work and by reflecting on learning and its development throughout the course;
- Communicate in the form of a scientific paper, construct spreadsheets in a self-documenting manner ready for reuse, and develop skills to estimate numerical values from first principles;
- Manage practical work in a group, showing responsibility and leadership (when required); account for engagement on the course through a blog that reflects on personal development throughout the course.
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Additional Information
Graduate Attributes and Skills |
Not entered |
Keywords | QDB |
Contacts
Course organiser | Dr Paul Mclaughlin
Tel: (0131 6)50 7060
Email: |
Course secretary | Miss Vicky Mactaggart
Tel: (0131 6)51 7052
Email: |
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© Copyright 2017 The University of Edinburgh - 6 February 2017 8:53 pm
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